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South Green Bioinformatics Platform (SGBP) is a bioinformatics platform applied to the genomic resource analysis of southern and mediterranean plants

   
   
   
     

Since June 2011, the EURIGEN database is open to the scientific community

June 2011 - The Eurigen Database manages genetic, phenotypic and genomic information on rice working collections of European institutions.
 
Data origin:

SNiPlay has been published

May 2011 -  SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects.
BMC Bioinformatics 2011, 12:134, link

New publication on oil palm

Timothy J. Tranbarger, Stéphane Dussert, Thierry Joët, Xavier Argout, Marilyne Summo, Antony Champion, David Cros, Alphonse Omore, Bruno Nouy, and Fabienne Morcillo
Regulatory mechanisms underlying oil palm fruit mesocarp maturation, ripening and functional specialization in lipid and carotenoid metabolism
Plant Physiology 2011 : pp.111.175141v1-pp.111.175141. Link.

The genome of Theobroma cacao has been published

On the 26th December, an international consortium (ICGS: International Cocoa Genome Sequencing Consortium), coordinated by a team from CIRAD in Montpellier (France), is publishing an article in Nature Genetics on the sequencing and the first detailed analyses of the cocoa genome Theobroma cacao.

GreenPhylDB version 2 has been published

The latest publication of GreenPhylDB is now available in advance access at Nucleic Acids Research.

If GreenPhyl has been useful for your research, please please cite us:
Rouard,M., Guignon,V., Aluome,C., Laporte,M., Droc,G., Walde,C., Zmasek,C.M., Périn,C. et Conte,M.G. GreenPhylDB v2.0: comparative and functional genomics in plants. Nucleic Acids Research, 10.1093/nar/gkq811

Cocoa genome is sequenced

The genome of Theobroma cacao was sequenced, http://precedings.nature.com/documents/4908/version/1
Data will be released to public access on the date of publication.
Sequence reads will be hosted at http://cocoagendb.cirad.fr/gbrowse
 

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